Inserting Space Between Lines In Conditional Formatting

I need to create a spreadsheet that has approximately 1000 rows with the same exact information in each of them prefilled (as I use the "drag-down" method). I use this chart throughout the year to enter various bits of data in each row. I also use conditional formatting in each row. The company I work for wants to have an empty space between each row.
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You can create the blank rows separately and then interleave them with the existing rows by sorting. To start, insert a new column to the left of the existing column A. Enter 1 in cell A1 and highlight column A all the way to the last row that contains data. From the Edit menu select Fill | Series and click on OK. Column A should now contain numbers from 1 to the total number of rows. Press Ctrl-C to copy these cells to the clipboard, click in the cell just below the last of them, and press Ctrl-V to paste. Now highlight the entire data area, including the new rows with just a number in column A. Select Sort from the Data menu and choose the No header row option in the resulting dialog box. Under Sort by select Column A, under Then by select column B, and click on OK. Finally, delete column A. You now have a blank row after every one of the original 1,000-odd rows."

This works great for the data that I copied (with the drag down method) to all the rows. However, this method does not insert an empty line in between all the conditional formatting I have throughout the spreadsheet. This is my conditional formatting formula I have "manage rules" which is under "conditional formatting" =NOT(ISBLANK($A6)) (*please take note that this is selected for 1000 rows.) Maybe there is some kind of change in the formula that I need in order for the conditional formatting method to be copied onto every 2nd line of the 1000 rows".